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In my laboratory we employ a multifaceted approach to research.
We study the three-dimensional structures of proteins in detail
and use this information to construct hypotheses about interactions
that may be crucial for a protein's stability or function.
We then test these hypotheses by using molecular biology techniques
to create mutant proteins with amino acid substitutions at positions
we believe to be important. The in vitro properties of these mutant
proteins are assessed using biophysical methods such as
circular dichroism spectroscopy, tryptophan fluorescence spectroscopy,
and nuclear magnetic resonance spectroscopy.In this way, can determine
exactly how particular amino acid substitutions affect the protein's
activity and thermodynamic stability.We also assess the ability of these
mutant proteins to carry out their normal functions inside the cell.
All of this research is aided by our studies in the area of bioinformatics.
These investigations involve the construction and careful analysis of
large and comprehensive sequence alignments. We are developing new methods
to extract useful information from this rich source of data, and we have designed
a number of successful experiments based on conclusions drawn
from our bioinformatics studies.
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